BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C12SP1|AL429554
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1537 862 0.0
3x_Contig506 783 0.0
>3x_Contig1537
Length = 10796
Score = 862 bits (435), Expect = 0.0
Identities = 442/443 (99%), Gaps = 1/443 (0%)
Strand = Plus / Minus
Query: 1 gatcttttacaaattatccattttcattcgcatcctgaaaagagactaataccgccaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gatcttttacaaattatccattttcattcgcatcctgaaaagagactaataccgccaagg 390
Query: 61 atgctcaaatcaataatgtggcaaattcttgatggtgtttcttatttgcatcagaactgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atgctcaaatcaataatgtggcaaattcttgatggtgtttcttatttgcatcagaactgg 330
Query: 121 attcttcatagagacttaaagcccgctaacattatggttaccgttgatggctgcgtcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 attcttcatagagacttaaagcccgctaacattatggttaccgttgatggctgcgtcaag 270
Query: 181 atcggtgatcttggtctagcgagaaaattcaataacatggtacagactttatacactggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atcggtgatcttggtctagcgagaaaattcaataacatggtacagactttatacactggt 210
Query: 241 gataaggttattgtaacaatttggtatcgtgccccagaacttatacttggagctcgacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gataaggttattgtaacaatttggtatcgtgccccagaacttatacttggagctcgacat 150
Query: 301 tatactcctgcaatagatctttgggctgtt-ggttgtatttttgcagaactcatcggttt 359
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 149 tatactcctgcaatagatctttgggctgttgggttgtatttttgcagaactcatcggttt 90
Query: 360 aaggccaatctttaaaggtgaagaggccaagatggagtccaagaagagtgttctgtttca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aaggccaatctttaaaggtgaagaggccaagatggagtccaagaagagtgttctgtttca 30
Query: 420 agctaatcagtttcaaaaaatat 442
|||||||||||||||||||||||
Sbjct: 29 agctaatcagtttcaaaaaatat 7
>3x_Contig506
Length = 1733
Score = 783 bits (395), Expect = 0.0
Identities = 395/395 (100%)
Strand = Plus / Minus
Query: 469 aaaatatggccgaatatcgacagttatccagaatatcttcagttggcaaaaatgccaaaa 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1721 aaaatatggccgaatatcgacagttatccagaatatcttcagttggcaaaaatgccaaaa 1662
Query: 529 tatcgtgacaatttaacagcatggtatcagaccgctggcggtaaggacaagactgcttta 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1661 tatcgtgacaatttaacagcatggtatcagaccgctggcggtaaggacaagactgcttta 1602
Query: 589 gacattctttaccgtctattgcagtatgatcctatcaagagaatcgatgcaatcgacgct 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1601 gacattctttaccgtctattgcagtatgatcctatcaagagaatcgatgcaatcgacgct 1542
Query: 649 ttagaccatgtctatttcaccaacggcgaccctcctgtctgtgaaaatgtgttcgagggt 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1541 ttagaccatgtctatttcaccaacggcgaccctcctgtctgtgaaaatgtgttcgagggt 1482
Query: 709 ctcaactacaaatacccaccaaggcgcattcacacaaacgataacgacattacgaatgtc 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1481 ctcaactacaaatacccaccaaggcgcattcacacaaacgataacgacattacgaatgtc 1422
Query: 769 ggcaatgataataatcaagctaatcactctcaaaaacaaccaatgcatggtaacaataat 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 ggcaatgataataatcaagctaatcactctcaaaaacaaccaatgcatggtaacaataat 1362
Query: 829 aataagaatgggaacatgaacggattaggtgtaaa 863
|||||||||||||||||||||||||||||||||||
Sbjct: 1361 aataagaatgggaacatgaacggattaggtgtaaa 1327
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6583
Number of Sequences: 1807
Number of extensions: 6583
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 2
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)